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Research Paper|Volume 15, Issue 14|pp 6865—6893

Comprehensive analysis of the role of a four-gene signature based on EMT in the prognosis, immunity, and treatment of lung squamous cell carcinoma

Feng Li1, Hui Wang2, Can Wang3, Yun Li4, Jing-Yan Song4, Ke-Yi Fan4, Chao Li5, Quan-Lin Ma6, Qi Yu3,7, Shuang-Ping Zhang5
  • 1Department of Cell Biology, Shanxi Province Cancer Hospital, Chinese Academy of Medical Sciences, Cancer Hospital Affiliated to Shanxi Medical University, Taiyuan, China
  • 2Department of Thoracic Surgery, Yangquan First People's Hospital, Yangquan, China
  • 3Shanxi Medical University, School of Management, Taiyuan, China
  • 4The First Clinical Medical College, Shanxi Medical University, Taiyuan, China
  • 5Department of Thoracic Surgery, Shanxi Province Cancer Hospital, Shanxi Hospital Affiliated to Cancer Hospital, Chinese Academy of Medical Sciences, Affiliated Tumor Hospital of Shanxi Medical University, Taiyuan, China
  • 6Department of Cardiothoracic Surgery, Shanxi Fenyang Hospital, Fenyang, China
  • 7Institute of Medical Data Science, Shanxi Medical University, Taiyuan, China
* Equal contribution and share first authorship
Received: April 3, 2023Accepted: June 15, 2023Published: July 17, 2023

Copyright: © 2023 Li et al. This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Abstract

Epithelial-mesenchymal transition (EMT), a biological process through which epithelial cells transform into mesenchymal cells, contributes to tumor progression and metastasis. However, a comprehensive analysis of the role of EMT-related genes in Lung squamous cell carcinoma (LUSC) is still lacking. In this study, data were downloaded from available databases, including The Cancer Genome Atlas (TCGA) database and the Gene Expression Omnibus (GEO) database. The association between differentially expressed EMT-related genes (EMT-RDGs) and LUSC prognosis, drug sensitivity, mutation, and immunity was analyzed using bioinformatics methods. In the results, Lasso and univariate Cox regression analyses identified four EMT-RDGs that were differentially expressed, and used to establish a prognostic model capable of distinguishing between high- and low-risk groups. Then, prognostic factors were identified by multivariate Cox regression analysis and used to construct a nomogram. The high-risk group had a significantly poorer prognosis than the low-risk group. The tumor immune environment was significantly different between the two groups, with the low-risk group exhibiting a better response to immunotherapy. In addition, the half-maximal inhibitory concentration prediction indicating that the constructed model could effectively predict sensitivity to chemotherapy. This study provides new reference for further exploration of new clinical therapeutic strategies for LUSC.