Research Paper Volume 14, Issue 17 pp 6957—6974

Integrated PPI- and WGCNA-retrieval of hub gene signatures for soft substrates inhibition of human fibroblasts proliferation and differentiation

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Figure 3. Soft substrates inhibited the proliferation of hFFs. (A) GSEA for cell cycle of mRNAs in soft/TCP. Enrichment score of cell cycle genes against their expression profile of soft/TCP. The x axis was the level, and the y axis was the enrichment score of these genes (left). Heat map showed the distribution of mRNAs expression of soft/TCP enriched under the cell cycle KEGG entry in all samples under the gene set, with each row representing one sample. Each line represented a gene, the color from blue to red represented mRNA expression from low to high (right). (B) Immunostaining against Ki67 of soft and TCP with or without TGF-β1 on day 1. Scale bars: 50 μm. (C) The positive rate of Ki67 in B. ***P < 0.001 (mean, n = 3 randomly selected fields from triplicate samples). (D) Detection of cell cycle by flow cytometry for soft and TCP with or without TGF-β1. (E) The percentage of PI. **P < 0.01; ***P < 0.001 (mean, n = 3). (F) The percentage of G1-, S-, and G2-phase in the cell cycle. *P < 0.05 vs. TCP; &&P < 0.01, &&&P < 0.001 vs. TCP+ TGF-β1 (mean, n = 3).